Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Caur_0605PFAM: TPR repeat-containing protein; SMART: helix-turn-helix domain protein; Tetratricopeptide domain protein; KEGG: rxy:Rxyl_2946 transcriptional regulator, LuxR family. (888 aa)    
Predicted Functional Partners:
Caur_3883
KEGG: lin:lin2753 hypothetical protein.
  
     0.744
Caur_3832
KEGG: rxy:Rxyl_0417 hypothetical protein.
  
     0.725
Caur_0602
PFAM: Rhodanese domain protein; protein of unknown function DUF1486; KEGG: rha:RHA1_ro04017 possible cyclase.
 
    0.716
Caur_3857
PFAM: extracellular solute-binding protein family 1; KEGG: pho:PH0753 multiple sugar transport system substrate-binding protein.
  
     0.699
Caur_1078
PFAM: extracellular solute-binding protein family 1; KEGG: rrs:RoseRS_3619 extracellular solute-binding protein, family 1.
  
     0.694
Caur_3079
PFAM: TPR repeat-containing protein; transcriptional activator domain; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_1015 transcriptional regulator, SARP family.
 
  
 0.690
Caur_0074
PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: gvi:gll3709 polysaccharide transporter, PST family.
  
     0.674
rpoC
DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.674
rpoB
DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.674
Caur_2174
KEGG: bra:BRADO4374 hypothetical protein.
  
    0.630
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.