STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_0647PFAM: NHL repeat containing protein; KEGG: rrs:RoseRS_2986 PA14 domain protein. (1212 aa)    
Predicted Functional Partners:
Caur_3525
KEGG: rca:Rcas_0224 hypothetical protein.
  
 
 0.845
Caur_0624
KEGG: sus:Acid_0492 conserved hypothetical protein, transmembrane prediction.
  
 
 0.722
Caur_0845
PFAM: cytochrome c class I; KEGG: rca:Rcas_2631 cytochrome c class I.
  
 
 0.722
Caur_0980
PFAM: cytochrome c class I; KEGG: rca:Rcas_2780 cytochrome c class I.
  
 
 0.722
Caur_2754
PAS sensor protein; KEGG: rca:Rcas_3420 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
  
   
 0.615
Caur_1388
PFAM: Na-Ca exchanger/integrin-beta4; KEGG: afw:Anae109_2925 hypothetical protein.
 
    0.585
Caur_2255
PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: ter:Tery_0647 adenylate/guanylate cyclase.
  
     0.516
Caur_1127
PFAM: Forkhead-associated protein; adenylyl cyclase class-3/4/guanylyl cyclase; GAF domain protein; KEGG: rrs:RoseRS_1638 putative adenylate/guanylate cyclase.
  
     0.490
Caur_3334
PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_2662 adenylyl cyclase class-3/4/guanylyl cyclase.
  
     0.489
Caur_3520
PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: mxa:MXAN_3956 putative adenylate cyclase.
  
     0.471
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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