STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_0714Deoxyribodipyrimidine photo-lyase; PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: sru:SRU_2330 deoxyribodipyrimidine photolyase, putative. (510 aa)    
Predicted Functional Partners:
Caur_0440
PFAM: deoxyribodipyrimidine photolyase-related protein; KEGG: rrs:RoseRS_0009 deoxyribodipyrimidine photolyase-related protein.
 
   
 0.815
Caur_1176
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
   0.582
Caur_1846
KEGG: ppf:Pput_3021 hypothetical protein.
 
     0.556
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
  
   0.541
ybeY
Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
    
   0.526
Caur_2631
KEGG: rrs:RoseRS_4204 FAD dependent oxidoreductase.
 
     0.522
Caur_1779
PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: xac:XAC2171 transcriptional regulator LysR family.
  
   
 0.502
Caur_2685
PFAM: regulatory protein MerR; cobalamin B12-binding domain protein; KEGG: rrs:RoseRS_2116 regulatory protein, MerR.
 
  
 0.498
Caur_0713
PFAM: Tetratricopeptide TPR_4; KEGG: rca:Rcas_2727 glycosyl transferase family 39.
   
   0.431
Caur_0712
PFAM: Tetratricopeptide TPR_4; KEGG: rrs:RoseRS_2658 glycosyl transferase, family 39.
       0.423
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.