Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Caur_0723KEGG: csc:Csac_2594 hypothetical protein. (463 aa)    
Predicted Functional Partners:
Caur_0722
KEGG: cte:CT1915 hypothetical protein.
       0.793
Caur_0724
PFAM: UvrD/REP helicase; KEGG: har:HEAR2199 putative DNA helicase II, UvrD Rep family.
       0.773
Caur_0721
PFAM: D12 class N6 adenine-specific DNA methyltransferase; KEGG: drm:Dred_0878 D12 class N6 adenine-specific DNA methyltransferase.
       0.769
Caur_0725
Hypothetical protein; KEGG: net:Neut_2605 UvrD/REP helicase.
       0.675
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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