STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_0740PFAM: Methyltransferase type 11; KEGG: rrs:RoseRS_2472 methyltransferase type 11. (355 aa)    
Predicted Functional Partners:
Caur_0739
Hypothetical protein.
       0.825
Caur_0742
PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_2470 glycosyl transferase, group 1.
 
     0.820
Caur_0741
PFAM: GCN5-related N-acetyltransferase; KEGG: rca:Rcas_2342 GCN5-related N-acetyltransferase.
 
     0.805
Caur_0712
PFAM: Tetratricopeptide TPR_4; KEGG: rrs:RoseRS_2658 glycosyl transferase, family 39.
  
     0.743
Caur_2544
KEGG: rca:Rcas_1976 hypothetical protein.
  
     0.728
Caur_0713
PFAM: Tetratricopeptide TPR_4; KEGG: rca:Rcas_2727 glycosyl transferase family 39.
  
     0.727
Caur_2529
KEGG: rrs:RoseRS_2034 hypothetical protein.
  
     0.725
Caur_0711
KEGG: rrs:RoseRS_2657 hypothetical protein.
  
     0.724
Caur_1578
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_1146 tetratricopeptide TPR_2 repeat protein.
 
     0.720
Caur_1864
PFAM: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: rca:Rcas_2671 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD.
  
     0.707
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.