STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_0775PFAM: VWA containing CoxE family protein; SMART: von Willebrand factor type A; KEGG: rrs:RoseRS_2165 VWA containing CoxE family protein. (396 aa)    
Predicted Functional Partners:
Caur_0774
Hypothetical protein; KEGG: rca:Rcas_3705 TPR repeat-containing protein.
       0.825
Caur_0984
PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: rrs:RoseRS_2166 ATPase associated with various cellular activities, AAA_5.
 
     0.806
Caur_2811
PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: rca:Rcas_0654 ATPase associated with various cellular activities AAA_5.
 
     0.805
Caur_3470
PFAM: carbon monoxide dehydrogenase subunit G; KEGG: rrs:RoseRS_0339 carbon monoxide dehydrogenase subunit G.
 
     0.792
Caur_3468
PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: rca:Rcas_0842 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding.
 
     0.780
Caur_2105
PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: rrs:RoseRS_2447 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding.
 
     0.764
Caur_3467
PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: rca:Rcas_0841 molybdopterin dehydrogenase FAD-binding.
 
     0.748
Caur_0776
PFAM: protein of unknown function DUF6 transmembrane; KEGG: bbr:BB1585 hypothetical protein.
       0.498
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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