Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Caur_0782KEGG: rrs:RoseRS_1482 hypothetical protein. (161 aa)    
Predicted Functional Partners:
Caur_2922
KEGG: rca:Rcas_2072 hypothetical protein.
 
     0.949
Caur_0781
PFAM: Peptidoglycan-binding domain 1 protein; KEGG: rrs:RoseRS_0605 hypothetical protein.
       0.773
Caur_2967
KEGG: rca:Rcas_0289 hypothetical protein.
  
     0.769
Caur_3769
KEGG: rrs:RoseRS_3863 laminin G, sub domain 2.
 
 
 
 0.751
Caur_3770
PFAM: Laminin G sub domain 2; SMART: Laminin G; LamG domain protein jellyroll fold domain protein; KEGG: rca:Rcas_0555 laminin G sub domain 2.
 
 
 
 0.748
UbiA
PFAM: UbiA prenyltransferase; KEGG: ava:Ava_3472 hypothetical protein.
 
     0.736
Caur_0406
PFAM: protein of unknown function UPF0044; KEGG: mgm:Mmc1_3700 protein of unknown function UPF0044.
  
  
 0.727
Caur_2352
Carotene 7,8-desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: syc:syc2113_c phytoene dehydrogenase, phytoene desaturase.
  
     0.724
rsfS
Iojap-like protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.
  
  
 0.658
aroE
Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).
  
  
 0.639
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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