STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_0786PFAM: extracellular solute-binding protein family 5; KEGG: rca:Rcas_0383 extracellular solute-binding protein family 5. (636 aa)    
Predicted Functional Partners:
Caur_0787
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_4598 binding-protein-dependent transport systems inner membrane component.
 
 
 0.922
Caur_0788
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rca:Rcas_0385 binding-protein-dependent transport systems inner membrane component.
 
 
 0.888
Caur_2080
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: rca:Rcas_4052 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein.
  
    0.804
Caur_2783
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bld:BLi01227 oligopeptide ABC transporter (permease); RBL00622.
 
 
 0.681
Caur_1625
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rca:Rcas_1059 binding-protein-dependent transport systems inner membrane component.
 
 
 0.679
Caur_2782
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gur:Gura_2052 binding-protein-dependent transport systems inner membrane component.
 
 
 0.640
Caur_1365
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aeh:Mlg_1085 binding-protein-dependent transport systems inner membrane component.
 
 
 0.634
Caur_0325
PFAM: extracellular solute-binding protein family 1; KEGG: nmu:Nmul_A0732 extracellular solute-binding protein, family 1.
      
 0.629
Caur_0486
PFAM: protein of unknown function RIO1; protein kinase; tyrosine protein kinase; PASTA domain containing protein; SMART: serine/threonine protein kinase; KEGG: rrs:RoseRS_2631 protein kinase.
  
  
 0.606
Caur_2958
PFAM: protein kinase; TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; Tetratricopeptide domain protein; KEGG: rrs:RoseRS_0666 protein kinase.
     
 0.605
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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