STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_0806KEGG: sus:Acid_4167 4-hydroxyphenylpyruvate dioxygenase; TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase. (365 aa)    
Predicted Functional Partners:
Caur_2513
PFAM: homogentisate 12-dioxygenase; KEGG: bcy:Bcer98_0230 homogentisate 12-dioxygenase.
 
 0.996
UbiA
PFAM: UbiA prenyltransferase; KEGG: ava:Ava_3472 hypothetical protein.
  
  
 0.919
Caur_2355
PFAM: aminotransferase class I and II; KEGG: drm:Dred_1696 aminotransferase, class I and II.
   
 
 0.917
hisC
KEGG: mta:Moth_0515 histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class V; aminotransferase class I and II; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
    
 0.912
hisC-2
TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; KEGG: rca:Rcas_0200 histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
    
 0.912
Caur_2512
KEGG: sru:SRU_2360 fumarylacetoacetase; TIGRFAM: fumarylacetoacetase; PFAM: fumarylacetoacetate (FAA) hydrolase; Domain of unknown function DUF1969.
 
  
 0.860
Caur_2799
PFAM: aromatic amino acid hydroxylase; KEGG: sru:SRU_2069 tryptophan 5-hydroxylase 1.
 
  
 0.819
Caur_0592
PFAM: Amidase; KEGG: rxy:Rxyl_0238 amidase; Belongs to the amidase family.
  
 
  0.817
Caur_1600
PFAM: Amidase; KEGG: mxa:MXAN_3566 amidase.
  
 
  0.817
Caur_0805
PFAM: transcriptional regulator TrmB; KEGG: sus:Acid_1756 transcriptional regulator, TrmB.
 
     0.602
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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