Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Caur_0822PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_3212 cyclic nucleotide-binding protein. (227 aa)    
Predicted Functional Partners:
Caur_0823
PFAM: protein of unknown function DUF214; KEGG: rrs:RoseRS_1075 protein of unknown function DUF214.
 
 
 0.998
Caur_1169
PFAM: protein of unknown function DUF214; KEGG: rca:Rcas_1126 protein of unknown function DUF214.
 
 0.989
Caur_0996
PFAM: protein of unknown function DUF214; KEGG: rca:Rcas_0266 protein of unknown function DUF214.
 
 0.988
Caur_1153
KEGG: tpt:Tpet_0895 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
    
0.907
Caur_0821
PFAM: secretion protein HlyD family protein; KEGG: rrs:RoseRS_3638 secretion protein HlyD family protein.
 
  
 0.851
Caur_0998
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rca:Rcas_0268 efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.836
Caur_1168
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rca:Rcas_1203 efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.814
Caur_3402
PFAM: secretion protein HlyD family protein; KEGG: rca:Rcas_0268 efflux transporter, RND family, MFP subunit.
 
 
 0.739
Caur_2119
PFAM: secretion protein HlyD family protein; KEGG: rrs:RoseRS_3638 secretion protein HlyD family protein.
 
 
 0.694
Caur_0820
PFAM: regulatory protein TetR; KEGG: rca:Rcas_1767 transcriptional regulator, TetR family.
   
 
 0.685
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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