STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_0826PFAM: protein of unknown function DUF162; KEGG: rca:Rcas_1855 protein of unknown function DUF162. (232 aa)    
Predicted Functional Partners:
Caur_0829
PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: rrs:RoseRS_4458 protein of unknown function DUF224, cysteine-rich region domain protein.
 
 
 0.909
Caur_2135
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: rca:Rcas_4296 protein of unknown function DUF224 cysteine-rich region domain protein.
 
 
 0.845
Caur_0825
Glyoxylate reductase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: rrs:RoseRS_0216 glyoxylate reductase.
     
 0.812
GlpC
TIGRFAM: glycerol-3-phosphate dehydrogenase, anaerobic, C subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: rrs:RoseRS_3301 4Fe-4S ferredoxin, iron-sulfur binding domain protein.
 
 
 0.800
Caur_0827
PFAM: GCN5-related N-acetyltransferase; KEGG: rci:RRC299 putative acetyltransferase (GNAT family).
       0.773
Caur_0181
PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: rrs:RoseRS_4179 protein of unknown function DUF224, cysteine-rich region domain protein.
 
 
 0.698
Caur_1809
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: rrs:RoseRS_4457 protein of unknown function DUF224, cysteine-rich region domain protein.
  
 
 0.612
Caur_2080
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: rca:Rcas_4052 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein.
     
 0.412
Caur_2866
PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mjl:Mjls_0328 regulatory protein GntR, HTH.
 
   
 0.405
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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