Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Caur_0835KEGG: rrs:RoseRS_1245 NB-ARC domain protein. (223 aa)    
Predicted Functional Partners:
Caur_0834
KEGG: rrs:RoseRS_1243 hypothetical protein.
 
     0.837
Caur_1789
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: pmf:P9303_28481 hypothetical protein.
 
 
 0.809
Caur_2553
PFAM: protein of unknown function DUF820; KEGG: rca:Rcas_0614 protein of unknown function DUF820.
  
     0.684
Caur_0785
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_3; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_2583 tetratricopeptide TPR_2 repeat protein.
  
     0.669
Caur_2432
PFAM: protein of unknown function DUF820; KEGG: rca:Rcas_0614 protein of unknown function DUF820.
  
     0.664
Caur_3879
PFAM: protein of unknown function DUF820; KEGG: rca:Rcas_0614 protein of unknown function DUF820.
  
     0.652
Caur_1818
PFAM: protein of unknown function DUF820; KEGG: rca:Rcas_2294 protein of unknown function DUF820.
  
     0.648
Caur_3157
SMART: WD-40 repeat protein; KEGG: dge:Dgeo_2673 WD-40 repeat.
  
 
  0.608
Caur_2514
PFAM: protein of unknown function DUF820; KEGG: rca:Rcas_2194 protein of unknown function DUF820.
  
     0.598
Caur_1238
KEGG: rca:Rcas_3601 hypothetical protein.
 
 
   0.582
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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