Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Caur_0897PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: rrs:RoseRS_2673 pyridoxamine 5'-phosphate oxidase-related, FMN-binding. (142 aa)    
Predicted Functional Partners:
Caur_1590
KEGG: mjl:Mjls_0743 hypothetical protein.
  
     0.728
Caur_0433
PFAM: luciferase family protein; KEGG: rrs:RoseRS_1121 luciferase family protein.
  
     0.695
rsmA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
       0.682
Caur_0899
PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: rca:Rcas_0284 multi-sensor signal transduction histidine kinase.
       0.682
Caur_1395
KEGG: rrs:RoseRS_1517 coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductase-like protein.
  
     0.682
Caur_3615
TIGRFAM: F420-dependent oxidoreductase; PFAM: protein of unknown function DUF129; KEGG: rrs:RoseRS_1136 F420-dependent oxidoreductase, putative.
  
     0.626
Caur_1222
PFAM: phospholipid/glycerol acyltransferase; KEGG: rrs:RoseRS_0082 phospholipid/glycerol acyltransferase.
 
     0.623
Caur_2862
KEGG: rha:RHA1_ro05154 hypothetical protein.
  
     0.608
Caur_0204
TIGRFAM: LPPG domain protein containing protein; PFAM: protein of unknown function UPF0052 and CofD; KEGG: rca:Rcas_3979 LPPG domain containing protein.
  
     0.563
Caur_3331
PFAM: ribonucleotide reductase; KEGG: rca:Rcas_3780 ribonucleotide reductase.
 
     0.557
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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