STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_0914PFAM: phosphoesterase PA-phosphatase related; KEGG: nmu:Nmul_A0927 phosphoesterase, PA-phosphatase related. (429 aa)    
Predicted Functional Partners:
Caur_1388
PFAM: Na-Ca exchanger/integrin-beta4; KEGG: afw:Anae109_2925 hypothetical protein.
  
 
 0.835
Caur_0913
Hypothetical protein.
       0.723
Caur_0912
TIGRFAM: conserved repeat domain protein; PFAM: protein of unknown function DUF11; Cna B domain protein; KEGG: rrs:RoseRS_2196 conserved repeat domain.
 
     0.576
Caur_0716
PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: gur:Gura_0383 peptidase S8 and S53, subtilisin, kexin, sedolisin.
  
   0.445
Caur_0657
KEGG: gfo:GFO_1731 hypothetical protein.
  
    0.442
Caur_3756
KEGG: rrs:RoseRS_4226 membrane protein-like protein.
  
     0.438
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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