STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_0932PFAM: inner-membrane translocator; KEGG: rrs:RoseRS_2977 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (449 aa)    
Predicted Functional Partners:
Caur_0931
PFAM: inner-membrane translocator; KEGG: rca:Rcas_1893 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
0.999
Caur_0933
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_2978 ABC transporter related.
 
 0.999
Caur_0934
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rca:Rcas_1896 ABC transporter related.
 
 0.999
Caur_1081
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_0627 ABC transporter related.
 
 0.998
Caur_1086
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_0622 ABC transporter related.
 
 0.998
Caur_3635
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_4105 ABC transporter related.
 
 0.998
Caur_3636
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_4106 ABC transporter related.
 
 0.998
Caur_1084
PFAM: inner-membrane translocator; KEGG: rrs:RoseRS_0624 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
0.996
Caur_3637
PFAM: inner-membrane translocator; KEGG: rrs:RoseRS_4107 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.991
Caur_1082
KEGG: rrs:RoseRS_0626 ABC-type branched-chain amino acid transport systems periplasmic component-like protein.
 
 
 0.983
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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