STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_0955PFAM: Fe-S metabolism associated SufE; KEGG: rrs:RoseRS_0718 Fe-S metabolism associated SufE. (151 aa)    
Predicted Functional Partners:
Caur_1659
PFAM: aminotransferase class V; KEGG: rrs:RoseRS_1377 aminotransferase, class V.
  
 
 0.858
Caur_1748
PFAM: aminotransferase class V; KEGG: sfu:Sfum_0911 aminotransferase, class V.
  
 
 0.858
Caur_1802
TIGRFAM: cysteine desulfurase family protein; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rrs:RoseRS_3113 cysteine desulfurase family protein.
  
 
 0.858
Caur_3483
Cysteine desulfurase, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
  
 
 0.858
Caur_3487
PFAM: Rhodanese domain protein; KEGG: rca:Rcas_0312 rhodanese domain protein.
 
     0.717
Caur_0956
Hypothetical protein.
       0.609
Caur_3481
TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; KEGG: rca:Rcas_0304 FeS assembly ATPase SufC.
  
 
 0.534
Caur_0957
Hypothetical protein.
       0.531
Caur_0958
KEGG: reu:Reut_A2014 hypothetical protein.
       0.531
Caur_3482
TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; KEGG: rca:Rcas_0305 FeS assembly protein SufD.
  
 
 0.406
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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