Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Caur_0958KEGG: reu:Reut_A2014 hypothetical protein. (705 aa)    
Predicted Functional Partners:
Caur_0957
Hypothetical protein.
       0.789
Caur_0584
PFAM: PBS lyase HEAT domain protein repeat-containing protein; KEGG: reu:Reut_A2011 hypothetical protein.
 
     0.773
Caur_1645
KEGG: sde:Sde_2285 hypothetical protein.
  
 
 
 0.772
Caur_0736
Hypothetical protein.
  
 
 
 0.770
Caur_2874
KEGG: reu:Reut_A2011 hypothetical protein.
 
     0.770
Caur_0885
Hypothetical protein; KEGG: rrs:RoseRS_2583 tetratricopeptide TPR_2 repeat protein.
 
     0.746
Caur_0912
TIGRFAM: conserved repeat domain protein; PFAM: protein of unknown function DUF11; Cna B domain protein; KEGG: rrs:RoseRS_2196 conserved repeat domain.
  
    0.731
Caur_3155
Hypothetical protein; KEGG: mxa:MXAN_7206 sensor histidine kinase/response regulator.
  
     0.725
Caur_1035
PFAM: GAF domain protein; KEGG: rrs:RoseRS_2414 GAF sensor signal transduction histidine kinase.
  
     0.716
Caur_1388
PFAM: Na-Ca exchanger/integrin-beta4; KEGG: afw:Anae109_2925 hypothetical protein.
 
 
 
 0.716
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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