STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_0960PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_1897 GAF sensor signal transduction histidine kinase. (470 aa)    
Predicted Functional Partners:
Caur_0466
PAS sensor protein; KEGG: rca:Rcas_2148 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
 
 
 0.951
Caur_3058
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: hha:Hhal_0365 response regulator receiver modulated diguanylate cyclase.
     0.936
Caur_1442
Histidine kinase; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rca:Rcas_3114 multi-sensor signal transduction histidine kinase.
 
 
0.901
Caur_1383
PAS sensor protein; KEGG: rrs:RoseRS_3026 signal transduction histidine kinase, nitrogen specific, NtrB; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
 
 
0.900
Caur_2056
PAS sensor protein; KEGG: rca:Rcas_2148 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAC repeat-containing protein.
 
 
0.900
Caur_3341
PAS sensor protein; KEGG: rca:Rcas_3671 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
 
 
0.899
Caur_0959
PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rca:Rcas_2795 two component transcriptional regulator, winged helix family.
 
 
 0.897
Caur_1785
KEGG: rrs:RoseRS_3849 nitrogen regulatory protein P-II.
  
 
 0.875
Caur_1676
PFAM: response regulator receiver; KEGG: rrs:RoseRS_0337 response regulator receiver protein.
 
 
 0.873
Caur_2319
PFAM: response regulator receiver; Roadblock/LC7 family protein; KEGG: dvl:Dvul_2845 two component, sigma54 specific, transcriptional regulator, fis family.
 
 
 0.860
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.