STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_0969PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rca:Rcas_3059 ABC transporter related. (315 aa)    
Predicted Functional Partners:
Caur_0970
KEGG: rca:Rcas_0864 hypothetical protein.
 
    0.931
Caur_3636
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_4106 ABC transporter related.
 
    
0.904
Caur_2041
PFAM: ABC-2 type transporter; KEGG: rca:Rcas_3060 hypothetical protein.
 
 
 0.877
Caur_0478
KEGG: rrs:RoseRS_2418 hypothetical protein.
 
 
 0.876
Caur_0480
KEGG: rca:Rcas_0864 hypothetical protein.
 
    0.774
Caur_3191
PFAM: von Willebrand factor type A; KEGG: rrs:RoseRS_2704 von Willebrand factor, type A.
 
     0.763
Caur_3110
PFAM: von Willebrand factor type A; KEGG: rrs:RoseRS_3544 von Willebrand factor, type A.
 
     0.760
Caur_2610
PFAM: von Willebrand factor type A; KEGG: rca:Rcas_1363 von Willebrand factor type A.
 
     0.757
Caur_3190
PFAM: von Willebrand factor type A; KEGG: rrs:RoseRS_2703 hypothetical protein.
  
     0.736
Caur_3409
TIGRFAM: conserved hypothetical membrane protein; SMART: von Willebrand factor type A; KEGG: rrs:RoseRS_1890 hypothetical protein.
 
     0.735
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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