STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_0971KEGG: rca:Rcas_0863 hypothetical protein. (516 aa)    
Predicted Functional Partners:
puf2C
Hypothetical protein; Serves as the immediate electron donor to the oxidized BChl2 (bacteriochlorophyll dimer) that is oxidized in the first step of light-induced charge separation. Can also oxidize low-potential substrates.
  
    0.865
Caur_0970
KEGG: rca:Rcas_0864 hypothetical protein.
 
     0.863
Caur_2646
PAS sensor protein; KEGG: rca:Rcas_0805 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
 
     0.803
Caur_2051
KEGG: rrs:RoseRS_2563 hypothetical protein.
 
     0.776
Caur_2637
KEGG: rrs:RoseRS_4324 hypothetical protein.
  
     0.773
Caur_0611
KEGG: rrs:RoseRS_0120 TPR repeat-containing protein.
  
     0.772
Caur_1339
PFAM: TPR repeat-containing protein; glycosyl transferase family 39; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rca:Rcas_0532 tetratricopeptide TPR_4.
 
     0.772
Caur_2669
KEGG: rrs:RoseRS_2363 hypothetical protein.
  
     0.771
Caur_3884
KEGG: rrs:RoseRS_4300 hypothetical protein.
  
     0.770
Caur_0584
PFAM: PBS lyase HEAT domain protein repeat-containing protein; KEGG: reu:Reut_A2011 hypothetical protein.
  
     0.769
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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