STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_0982PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_2510 glycosyl transferase, group 1. (348 aa)    
Predicted Functional Partners:
Caur_0983
KEGG: rrs:RoseRS_1231 hypothetical protein.
       0.825
Caur_0984
PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: rrs:RoseRS_2166 ATPase associated with various cellular activities, AAA_5.
       0.825
Caur_0742
PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_2470 glycosyl transferase, group 1.
  
     0.764
Caur_1245
PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_2261 glycosyl transferase group 1.
 
     0.759
Caur_1385
PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_4383 glycosyl transferase, group 1.
  
     0.758
Caur_1878
PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_2957 glycosyl transferase group 1.
  
     0.756
Caur_3253
PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_3583 glycosyl transferase, group 1.
  
     0.750
Caur_3761
PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_4232 glycosyl transferase, group 1.
  
     0.743
Caur_0642
PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_2472 glycosyl transferase group 1.
  
     0.740
Caur_0160
PFAM: glycosyl transferase group 1; KEGG: rxy:Rxyl_2575 glycosyl transferase, group 1.
  
     0.736
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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