STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_0991PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_3120 glycosyl transferase, group 1. (366 aa)    
Predicted Functional Partners:
Caur_3733
PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: rca:Rcas_1828 polysaccharide biosynthesis protein.
  
    0.737
Caur_3253
PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_3583 glycosyl transferase, group 1.
 
     0.736
Caur_0742
PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_2470 glycosyl transferase, group 1.
  
     0.686
Caur_0964
PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_1488 glycosyl transferase group 1.
  
     0.686
Caur_1594
PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_1288 glycosyl transferase group 1.
  
     0.683
Caur_0982
PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_2510 glycosyl transferase, group 1.
  
     0.677
Caur_3241
PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_4294 glycosyl transferase group 1.
  
     0.658
Caur_3318
PFAM: O-antigen polymerase; KEGG: rrs:RoseRS_4391 O-antigen polymerase.
  
    0.650
Caur_0642
PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_2472 glycosyl transferase group 1.
  
     0.647
Caur_0160
PFAM: glycosyl transferase group 1; KEGG: rxy:Rxyl_2575 glycosyl transferase, group 1.
  
     0.611
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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