Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Caur_1003KEGG: ace:Acel_0942 integral membrane protein. (268 aa)    
Predicted Functional Partners:
Caur_1658
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sma:SAV5847 putative ABC transporter ATP-binding subunit.
 
 0.980
Caur_0793
thiW protein; KEGG: rca:Rcas_4124 ABC transporter related; TIGRFAM: thiW protein; PFAM: ABC transporter related; ThiW family protein; SMART: AAA ATPase.
 
 0.928
Caur_1197
PFAM: cobalt transport protein; KEGG: sco:SCO2323 integral membrane protein.
 
 
 0.923
Caur_1201
TIGRFAM: LPXTG-motif cell wall anchor domain protein; KEGG: afu:AF1398 hypothetical protein.
 
     0.783
Caur_3579
PFAM: BioY protein; KEGG: cya:CYA_2210 BioY family protein.
   
 
 0.756
Caur_1200
KEGG: stp:Strop_4398 hypothetical protein.
 
     0.733
Caur_0792
PFAM: cobalt transport protein; KEGG: rrs:RoseRS_1922 cobalt transport protein.
  
 
 0.672
Caur_2575
TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: rrs:RoseRS_0562 cobalt ABC transporter, inner membrane subunit CbiQ.
  
 
 0.672
Caur_3681
TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: rrs:RoseRS_0170 cobalt ABC transporter, inner membrane subunit CbiQ.
  
 
 0.672
Caur_2566
KEGG: rca:Rcas_0638 precorrin-4 C11-methyltransferase; TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Belongs to the precorrin methyltransferase family.
  
  
 0.631
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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