STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_1027PFAM: extracellular solute-binding protein family 5; KEGG: deb:DehaBAV1_0943 extracellular solute-binding protein, family 5. (594 aa)    
Predicted Functional Partners:
Caur_1028
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: deb:DehaBAV1_0942 nickel-transporting ATPase.
 0.997
Caur_1029
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: deb:DehaBAV1_0941 binding-protein-dependent transport systems inner membrane component.
 
 
 0.993
Caur_2260
KEGG: rrs:RoseRS_0419 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
 
 0.986
Caur_2261
KEGG: rrs:RoseRS_0418 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
 
 0.986
Caur_1365
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aeh:Mlg_1085 binding-protein-dependent transport systems inner membrane component.
 
 0.957
Caur_2783
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bld:BLi01227 oligopeptide ABC transporter (permease); RBL00622.
 
 0.954
Caur_0787
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_4598 binding-protein-dependent transport systems inner membrane component.
 
 0.952
Caur_1625
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rca:Rcas_1059 binding-protein-dependent transport systems inner membrane component.
 
 
 0.937
Caur_1155
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pab:PAB0628 oligopeptide transport system permease protein.
 
 
 0.863
Caur_1627
KEGG: rrs:RoseRS_0416 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
  
 0.860
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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