STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
Caur_1095KEGG: rca:Rcas_2739 hypothetical protein. (567 aa)    
Predicted Functional Partners:
Caur_2213
NADH dehydrogenase (quinone); PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: aeh:Mlg_2090 NADH dehydrogenase (quinone).
  
 
 0.995
Caur_2215
PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: gsu:GSU2342 membrane protein, putative.
  
 
 0.970
Caur_2217
PFAM: cation antiporter; KEGG: rrs:RoseRS_2098 cation antiporter.
  
 
 0.963
Caur_1094
KEGG: rca:Rcas_2740 NADH-ubiquinone oxidoreductase chain 49kDa.
  
 
 0.959
Caur_2219
TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit; KEGG: maq:Maqu_2861 monovalent cation/proton antiporter, MnhG/PhaG subunit.
  
 
 0.957
Caur_2214
PFAM: Na+/H+ antiporter MnhB subunit-related protein; KEGG: pvi:Cvib_1258 Na+/H+ antiporter MnhB subunit-related protein.
  
 
 0.945
nuoB1
NADH-quinone oxidoreductase, B subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
   
 0.934
nuoB2
NADH-quinone oxidoreductase, B subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
   
 0.934
Caur_2218
PFAM: multiple resistance and pH regulation protein F; KEGG: dra:DR_0885 cation transport system protein, putative.
  
 
 0.928
Caur_2901
NADH-quinone oxidoreductase, F subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.
    
 0.913
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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