STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_1109PFAM: glycoside hydrolase family 38; glycosyl hydrolase 38 domain protein; Glycoside hydrolase family 38 central region; KEGG: rxy:Rxyl_0070 glycoside hydrolase, family 38. (907 aa)    
Predicted Functional Partners:
Caur_1110
PFAM: glycoside hydrolase family 3 domain protein; KEGG: rxy:Rxyl_0629 beta-N-acetylhexosaminidase.
  
  
 0.804
Caur_1111
PFAM: sugar isomerase (SIS); KEGG: rrs:RoseRS_2367 glutamine--fructose-6-phosphate transaminase (isomerizing).
       0.773
Caur_1927
PFAM: regulatory protein LuxR; response regulator receiver; KEGG: pmy:Pmen_0083 two component transcriptional regulator, LuxR family.
  
    0.657
Caur_2326
PFAM: response regulator receiver; KEGG: rrs:RoseRS_4041 response regulator receiver protein.
  
    0.657
Caur_3556
PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; KEGG: rrs:RoseRS_1740 glycoside hydrolase family 2, sugar binding.
 
   
 0.639
Caur_1022
PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: rrs:RoseRS_0825 uncharacterized MobA-related protein-like protein.
   
    0.629
Caur_1536
PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: asa:ASA_0164 maltodextrin glucosidase; Belongs to the glycosyl hydrolase 13 family.
 
  
 0.626
Caur_0705
PFAM: Fibronectin type III domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: rrs:RoseRS_2452 alpha amylase, catalytic region; Belongs to the glycosyl hydrolase 13 family.
 
  
 0.606
Caur_1108
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tel:tll1382 sugar transport system permease protein.
       0.583
Caur_1103
PFAM: ROK family protein; KEGG: rrs:RoseRS_4247 ROK family protein.
  
  
 0.571
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.