STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_1245PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_2261 glycosyl transferase group 1. (425 aa)    
Predicted Functional Partners:
Caur_0642
PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_2472 glycosyl transferase group 1.
  
     0.768
Caur_0964
PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_1488 glycosyl transferase group 1.
  
     0.768
Caur_0982
PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_2510 glycosyl transferase, group 1.
 
     0.759
Caur_1918
PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_3940 glycosyl transferase group 1.
  
     0.747
Caur_0891
PFAM: glycosyl transferase group 1; KEGG: cgt:cgR_0028 hypothetical protein.
  
    0.743
Caur_3241
PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_4294 glycosyl transferase group 1.
  
     0.712
Caur_1508
PFAM: glycosyl transferase group 1; KEGG: rpd:RPD_1110 glycosyl transferase, group 1.
  
     0.700
Caur_1919
PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_3942 glycosyl transferase group 1.
  
     0.659
Caur_1539
PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_0801 glycosyl transferase group 1.
  
     0.654
Caur_3761
PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_4232 glycosyl transferase, group 1.
  
     0.644
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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