STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_1279Leucyl aminopeptidase (aminopeptidase T)-like protein; KEGG: rci:RCIX531 predicted aminopeptidase. (358 aa)    
Predicted Functional Partners:
Caur_1280
PFAM: peptidase U32; KEGG: sus:Acid_6567 peptidase U32.
       0.797
Caur_1278
PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: mag:amb3351 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase.
       0.636
Caur_1277
KEGG: sus:Acid_2155 hypothetical protein.
       0.583
Caur_1276
Dihydrodipicolinate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding; oxidoreductase domain protein; dihydrodipicolinate reductase; homoserine dehydrogenase NAD-binding; KEGG: reh:H16_A3348 dihydrodipicolinate reductase; Belongs to the DapB family.
  
    0.544
Caur_1281
PFAM: Radical SAM domain protein; KEGG: rca:Rcas_3524 pyruvate-formate lyase-activating enzyme-like protein.
       0.525
Caur_1295
PFAM: protein of unknown function DUF92 transmembrane; KEGG: rca:Rcas_1824 protein of unknown function DUF92 transmembrane.
  
     0.441
Caur_1894
Carboxypeptidase Taq; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues.
 
  
 0.441
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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