STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_1430TIGRFAM: sortase family protein; PFAM: peptidase C60 sortase A and B; KEGG: rrs:RoseRS_4282 peptidase C60, sortase A and B. (350 aa)    
Predicted Functional Partners:
Caur_1429
PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: sth:STH1479 putative peptidase.
 
     0.737
Caur_1088
PFAM: cell wall hydrolase/autolysin; KEGG: rci:RCIX660 hypothetical protein.
  
     0.721
Caur_0253
Hypothetical protein; KEGG: rca:Rcas_2219 putative FHA domain containing protein.
  
     0.684
Caur_1130
KEGG: syf:Synpcc7942_1526 hypothetical protein.
 
     0.675
Caur_2644
KEGG: rca:Rcas_0803 N-acetylglucosamine-1-phosphate uridyltransferase-like protein.
  
     0.670
Caur_1608
PFAM: PHP domain protein; AAA-4 family protein; SMART: phosphoesterase PHP domain protein; KEGG: rrs:RoseRS_1312 AAA-4 family protein.
  
     0.668
Caur_1566
PFAM: GCN5-related N-acetyltransferase; KEGG: rrs:RoseRS_2655 GCN5-related N-acetyltransferase.
  
     0.659
Caur_0695
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_0774 TPR repeat-containing protein.
  
     0.639
Caur_3823
PFAM: WD40 domain protein beta Propeller; KEGG: rrs:RoseRS_2358 hypothetical protein.
  
     0.633
Caur_2549
KEGG: rrs:RoseRS_0243 glycosyl transferase, family 39.
  
     0.623
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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