STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_1548Beta-galactosidase; KEGG: rrs:RoseRS_3614 beta-glucosidase; TIGRFAM: beta-galactosidase; PFAM: glycoside hydrolase family 1. (462 aa)    
Predicted Functional Partners:
Caur_1536
PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: asa:ASA_0164 maltodextrin glucosidase; Belongs to the glycosyl hydrolase 13 family.
  
 
 0.959
Caur_1897
Alpha-glucosidase; PFAM: glycoside hydrolase family 31; KEGG: cyb:CYB_1375 glycosyl hydrolase, family 31; Belongs to the glycosyl hydrolase 31 family.
 
 0.931
Caur_0360
PFAM: glycoside hydrolase family 1; KEGG: sus:Acid_2768 glycoside hydrolase, family 1; Belongs to the glycosyl hydrolase 1 family.
  
  
 
0.923
Caur_2727
PFAM: Glycosyl hydrolase family 32 domain protein; SMART: glycoside hydrolase family 32; KEGG: hma:rrnAC1479 sucrose-6-phosphate hydrolase; Belongs to the glycosyl hydrolase 32 family.
   
 
 0.908
Caur_0361
PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase domain protein; KEGG: kra:Krad_0118 alpha-L-rhamnosidase.
  
 
 0.907
Caur_0379
PFAM: glycoside hydrolase family 3 domain protein; KEGG: rpc:RPC_1611 glycoside hydrolase, family 3-like; Belongs to the glycosyl hydrolase 3 family.
    
 0.904
Caur_1073
PFAM: glycoside hydrolase family 3 domain protein; PA14 domain protein; KEGG: rrs:RoseRS_3480 glycoside hydrolase, family 3 domain protein; Belongs to the glycosyl hydrolase 3 family.
    
 0.904
Caur_1075
PFAM: glycoside hydrolase family 3 domain protein; KEGG: sen:SACE_6502 glucan 1,4-beta-glucosidase precursor; Belongs to the glycosyl hydrolase 3 family.
    
 0.904
Caur_3869
PFAM: glycoside hydrolase family 3 domain protein; KEGG: sus:Acid_6936 glycoside hydrolase, family 3 domain protein; Belongs to the glycosyl hydrolase 3 family.
    
 0.904
Caur_1549
PFAM: major facilitator superfamily MFS_1; KEGG: rca:Rcas_4421 major facilitator superfamily MFS_1.
       0.794
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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