STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_1634PFAM: glycosyl transferase family 2; KEGG: ter:Tery_3238 glycosyl transferase, family 2. (335 aa)    
Predicted Functional Partners:
Caur_1637
PFAM: glycosyl transferase family 2; KEGG: rha:RHA1_ro05764 possible glycosyltransferase.
 
    0.845
Caur_1636
PFAM: glycosyl transferase family 2; KEGG: mva:Mvan_2680 glycosyl transferase, family 2.
 
 
 0.840
Caur_1635
PFAM: polysaccharide deacetylase; KEGG: bha:BH1917 chitooligosaccharide deacetylase.
 
  
 0.797
Caur_1641
PFAM: glycosyl transferase family 2; KEGG: mxa:MXAN_7448 glycosyl transferase, group 2 family protein.
 
 
 0.767
Caur_2116
PFAM: glycosyl transferase family 2; KEGG: kra:Krad_3285 glycosyl transferase family 2.
  
    0.712
Caur_1632
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KEGG: mag:amb0108 nucleoside-diphosphate-sugar epimerase.
 
   0.678
Caur_2125
PFAM: glycosyl transferase family 2; KEGG: afw:Anae109_1238 glycosyl transferase family 2.
  
     0.630
Caur_1633
Glutamine--scyllo-inositol transaminase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rle:pRL90155 putative DegT/DnrJ/EryC1/StrS family aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.623
Caur_1638
PFAM: glycosyl transferase family 2; KEGG: mva:Mvan_2680 glycosyl transferase, family 2.
 
 
 0.622
Caur_3844
PFAM: glycosyl transferase family 2; KEGG: rca:Rcas_1158 glycosyl transferase family 2.
 
 
 0.616
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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