STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_1640PFAM: transferase hexapeptide repeat containing protein; KEGG: ncr:NCU05153.1 hypothetical protein Pfam: Hexapep. (180 aa)    
Predicted Functional Partners:
Caur_1642
KEGG: tel:tlr0851 serine acetyltransferase.
 
  
 0.842
Caur_1641
PFAM: glycosyl transferase family 2; KEGG: mxa:MXAN_7448 glycosyl transferase, group 2 family protein.
  
  
 0.806
Caur_3776
KEGG: rca:Rcas_3969 transferase hexapeptide repeat containing protein.
  
     0.775
Caur_1643
PFAM: glycosyl transferase group 1; KEGG: cgt:cgR_0028 hypothetical protein.
 
  
 0.708
Caur_3908
PFAM: transferase hexapeptide repeat containing protein; KEGG: rca:Rcas_2008 transferase hexapeptide repeat containing protein.
  
     0.522
Caur_1639
Hypothetical protein.
       0.516
Caur_1054
KEGG: rca:Rcas_1950 undecaprenyl-phosphate galactose phosphotransferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.
  
  
 0.513
Caur_1475
PFAM: sugar transferase; KEGG: plt:Plut_1363 undecaprenyl-phosphate galactosephosphotransferase.
  
  
 0.513
Caur_1504
KEGG: rca:Rcas_4266 undecaprenyl-phosphate galactose phosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.
  
  
 0.513
Caur_3257
KEGG: rrs:RoseRS_3578 undecaprenyl-phosphate galactose phosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.
  
  
 0.513
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.