Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Caur_1757 | Caur_1758 | KEGG: rca:Rcas_3115 hypothetical protein. | TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: rca:Rcas_4083 putative regulatory protein, FmdB family. | 0.463 |
Caur_1757 | Caur_1759 | KEGG: rca:Rcas_3115 hypothetical protein. | PFAM: Nucleotidyl transferase; KEGG: rca:Rcas_4084 nucleotidyl transferase. | 0.463 |
Caur_1757 | Caur_1760 | KEGG: rca:Rcas_3115 hypothetical protein. | KEGG: rrs:RoseRS_0882 hypothetical protein. | 0.463 |
Caur_1758 | Caur_1757 | TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: rca:Rcas_4083 putative regulatory protein, FmdB family. | KEGG: rca:Rcas_3115 hypothetical protein. | 0.463 |
Caur_1758 | Caur_1759 | TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: rca:Rcas_4083 putative regulatory protein, FmdB family. | PFAM: Nucleotidyl transferase; KEGG: rca:Rcas_4084 nucleotidyl transferase. | 0.773 |
Caur_1758 | Caur_1760 | TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: rca:Rcas_4083 putative regulatory protein, FmdB family. | KEGG: rrs:RoseRS_0882 hypothetical protein. | 0.773 |
Caur_1759 | Caur_1757 | PFAM: Nucleotidyl transferase; KEGG: rca:Rcas_4084 nucleotidyl transferase. | KEGG: rca:Rcas_3115 hypothetical protein. | 0.463 |
Caur_1759 | Caur_1758 | PFAM: Nucleotidyl transferase; KEGG: rca:Rcas_4084 nucleotidyl transferase. | TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: rca:Rcas_4083 putative regulatory protein, FmdB family. | 0.773 |
Caur_1759 | Caur_1760 | PFAM: Nucleotidyl transferase; KEGG: rca:Rcas_4084 nucleotidyl transferase. | KEGG: rrs:RoseRS_0882 hypothetical protein. | 0.826 |
Caur_1760 | Caur_1757 | KEGG: rrs:RoseRS_0882 hypothetical protein. | KEGG: rca:Rcas_3115 hypothetical protein. | 0.463 |
Caur_1760 | Caur_1758 | KEGG: rrs:RoseRS_0882 hypothetical protein. | TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: rca:Rcas_4083 putative regulatory protein, FmdB family. | 0.773 |
Caur_1760 | Caur_1759 | KEGG: rrs:RoseRS_0882 hypothetical protein. | PFAM: Nucleotidyl transferase; KEGG: rca:Rcas_4084 nucleotidyl transferase. | 0.826 |