STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_1763PFAM: phospholipase/Carboxylesterase; KEGG: cyb:CYB_2836 phospholipase/carboxylesterase family protein. (222 aa)    
Predicted Functional Partners:
Caur_1764
PFAM: Peptidoglycan-binding LysM; KEGG: rrs:RoseRS_4013 peptidoglycan-binding LysM.
       0.825
Caur_1762
PFAM: LIM zinc-binding protein; KEGG: rrs:RoseRS_3343 LIM, zinc-binding protein.
       0.762
Caur_1236
KEGG: rca:Rcas_3603 small GTP-binding protein; TIGRFAM: small GTP-binding protein; PFAM: Miro domain protein; Ras family protein; SMART: Ras small GTPase, Ras type; Ras small GTPase, Rho type; Ras small GTPase, Rab type.
   
 0.706
Caur_2269
KEGG: rca:Rcas_3297 hypothetical protein.
   
 0.706
Caur_1765
TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: rrs:RoseRS_1714 cell envelope-related transcriptional attenuator.
       0.659
Caur_1761
PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_2289 glycosyl transferase group 1.
       0.655
Caur_1766
PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: rrs:RoseRS_4565 stage II sporulation E family protein.
       0.622
Caur_1767
PFAM: Aldehyde Dehydrogenase_; KEGG: rrs:RoseRS_0829 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
   0.434
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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