STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_1785KEGG: rrs:RoseRS_3849 nitrogen regulatory protein P-II. (105 aa)    
Predicted Functional Partners:
Caur_1002
TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: rca:Rcas_1902 ammonium transporter.
  
 
 0.997
Caur_1784
PFAM: protein of unknown function DUF897; KEGG: rrs:RoseRS_1985 protein of unknown function DUF897.
 
 
 
 0.992
Caur_0960
PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_1897 GAF sensor signal transduction histidine kinase.
  
 
 0.935
lysZ
Acetylglutamate kinase; Catalyzes the phosphorylation of LysW-gamma-alpha- aminoadipate; Belongs to the acetylglutamate kinase family. LysZ subfamily.
    
 
 0.914
argB
Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
    
 
 0.914
Caur_3170
PFAM: nitroreductase; KEGG: mca:MCA1372 nitroreductase family protein; Belongs to the flavin oxidoreductase frp family.
  
  
 0.715
Caur_1953
KEGG: rca:Rcas_1115 hypothetical protein.
  
 
 
 0.690
Caur_0637
PFAM: nitroreductase; KEGG: dge:Dgeo_1628 nitroreductase.
   
  
 0.671
Caur_3380
TIGRFAM: CRISPR-associated protein, TIGR02710 family; PFAM: CRISPR-associated protein Cas02710; KEGG: rrs:RoseRS_3021 hypothetical protein.
  
 
 
 0.671
Caur_3614
PFAM: nitroreductase; KEGG: rrs:RoseRS_1137 nitroreductase.
   
  
 0.671
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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