STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Caur_1925PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: fno:Fnod_1667 ABC transporter related. (507 aa)    
Predicted Functional Partners:
Caur_2288
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: rrs:RoseRS_2726 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
 
 0.984
Caur_2287
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: rrs:RoseRS_2727 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
 
 0.973
Caur_1924
KEGG: tte:TTE0290 Periplasmic sugar-binding proteins.
  
 0.951
Caur_1926
PFAM: inner-membrane translocator; KEGG: tte:TTE0292 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
  
 0.947
Caur_2286
ABC-type sugar transport system periplasmic component-like protein; KEGG: ret:RHE_PE00289 probable sugar ABC transporter, substrate-binding protein.
 
 
 0.890
Caur_1083
PFAM: inner-membrane translocator; KEGG: rrs:RoseRS_0625 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
    
 0.694
Caur_3638
PFAM: inner-membrane translocator; KEGG: rrs:RoseRS_4108 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
    
 0.502
Caur_0894
ATP-binding region ATPase domain protein; PFAM: helix-turn-helix- domain containing protein AraC type; periplasmic binding protein/LacI transcriptional regulator; response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_0204 integral membrane sensor hybrid histidine kinase.
  
  
 0.475
Caur_0700
PFAM: PfkB domain protein; KEGG: sat:SYN_02874 ribokinase.
 
  
 0.462
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
  
 0.438
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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