STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_2011PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: rca:Rcas_3761 protein of unknown function DUF404. (488 aa)    
Predicted Functional Partners:
Caur_2010
PFAM: protein of unknown function DUF403; KEGG: rrs:RoseRS_3275 protein of unknown function DUF403.
  
 0.997
Caur_2009
PFAM: transglutaminase domain protein; transglutaminase domain protein; KEGG: rrs:RoseRS_3273 transglutaminase, N-terminal domain protein.
 
  
 0.915
Caur_3581
Glutamate--cysteine ligase GCS2; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.
      0.908
Caur_3597
PFAM: transglutaminase domain protein; KEGG: rrs:RoseRS_0315 transglutaminase domain protein.
 
  
 0.436
Caur_2012
Stearoyl-CoA 9-desaturase; PFAM: fatty acid desaturase; KEGG: fra:Francci3_3960 stearoyl-CoA 9-desaturase.
       0.409
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.