STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_2012Stearoyl-CoA 9-desaturase; PFAM: fatty acid desaturase; KEGG: fra:Francci3_3960 stearoyl-CoA 9-desaturase. (294 aa)    
Predicted Functional Partners:
Caur_1341
TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: rrs:RoseRS_1506 cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family.
   
   0.655
Caur_3489
TIGRFAM: cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: rrs:RoseRS_0720 cysteine synthase.
   
   0.655
Caur_1515
PFAM: cytochrome P450; KEGG: mxa:MXAN_2304 cytochrome P450 family protein.
 
 0.586
Caur_2613
PFAM: cytochrome P450; KEGG: fra:Francci3_4464 cytochrome P450.
 
 0.580
Caur_2007
PFAM: phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; KEGG: ade:Adeh_2440 biotin carboxylase-like.
  
  
 0.573
Caur_0593
PFAM: Saccharopine dehydrogenase; KEGG: pfl:PFL_3454 hypothetical protein.
  
     0.480
Caur_3157
SMART: WD-40 repeat protein; KEGG: dge:Dgeo_2673 WD-40 repeat.
  
     0.465
Caur_2503
PFAM: WD-40 repeat protein; SMP-30/Gluconolaconase/LRE domain protein; KEGG: rrs:RoseRS_0892 WD-40 repeat protein.
  
     0.459
Caur_2667
PFAM: phosphatidate cytidylyltransferase; KEGG: rrs:RoseRS_3363 phosphatidate cytidylyltransferase.
    
 
 0.428
Caur_2011
PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: rca:Rcas_3761 protein of unknown function DUF404.
       0.409
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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