STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_2014Cellulase; PFAM: peptidase M18 aminopeptidase I; peptidase M42 family protein; KEGG: bha:BH3132 endo-1,4-beta-glucanase. (358 aa)    
Predicted Functional Partners:
Caur_2013
KEGG: rca:Rcas_4069 carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; Belongs to the peptidase S41A family.
       0.790
Caur_2015
PFAM: Polynucleotide adenylyltransferase region; KEGG: rca:Rcas_2466 polynucleotide adenylyltransferase region; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
       0.733
Caur_1160
KEGG: cya:CYA_1097 trehalose synthase/putative maltokinase; TIGRFAM: trehalose synthase; trehalose synthase-fused possible maltokinase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain.
   
  
 0.620
Caur_0493
PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: gka:GK0703 alpha-cyclodextrinase.
   
  
 0.507
Caur_0517
PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: rca:Rcas_4246 alpha amylase catalytic region.
   
  
 0.507
Caur_0705
PFAM: Fibronectin type III domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: rrs:RoseRS_2452 alpha amylase, catalytic region; Belongs to the glycosyl hydrolase 13 family.
   
  
 0.507
Caur_2539
PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: rba:RB5196 alpha-amylase, amylosucrase.
   
  
 0.507
Caur_3528
Alpha-amylase; KEGG: stp:Strop_2001 alpha-amylase; PFAM: glycoside hydrolase starch-binding; alpha amylase catalytic region; alpha amylase all-beta; SMART: alpha amylase catalytic sub domain.
   
  
 0.507
glgE
Alpha amylase catalytic region; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.
   
  
 0.506
Caur_1536
PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: asa:ASA_0164 maltodextrin glucosidase; Belongs to the glycosyl hydrolase 13 family.
   
  
 0.506
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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