STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_2016Hypothetical protein; KEGG: cme:CMH001C similar to hedgehog protein Pfam: Kelch_2 Kelch_1 Hint PROSITE: INTEIN_N_TER PRO_RICH THR_RICH. (317 aa)    
Predicted Functional Partners:
Caur_0584
PFAM: PBS lyase HEAT domain protein repeat-containing protein; KEGG: reu:Reut_A2011 hypothetical protein.
  
     0.696
Caur_0971
KEGG: rca:Rcas_0863 hypothetical protein.
  
     0.683
Caur_1645
KEGG: sde:Sde_2285 hypothetical protein.
  
     0.680
Caur_1612
KEGG: rrs:RoseRS_1607 hypothetical protein.
  
     0.668
Caur_2547
PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_3888 major facilitator superfamily MFS_1.
  
     0.660
Caur_1388
PFAM: Na-Ca exchanger/integrin-beta4; KEGG: afw:Anae109_2925 hypothetical protein.
 
  
 0.636
Caur_1035
PFAM: GAF domain protein; KEGG: rrs:RoseRS_2414 GAF sensor signal transduction histidine kinase.
  
    0.614
Caur_2927
PFAM: peptidase C1A papain; KEGG: reu:Reut_A2014 hypothetical protein.
  
     0.609
Caur_2608
KEGG: rrs:RoseRS_3023 hypothetical protein.
  
   
 0.591
Caur_2749
PFAM: protein of unknown function DUF1332; KEGG: rfr:Rfer_1818 protein of unknown function DUF1332.
  
     0.591
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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