STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_2020PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gtn:GTNG_0826 sugar transport system permease. (307 aa)    
Predicted Functional Partners:
Caur_2021
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ava:Ava_0461 binding-protein-dependent transport systems inner membrane component.
   0.966
Caur_3449
PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rrs:RoseRS_0525 ABC transporter related.
 
 
 0.946
Caur_2022
PFAM: extracellular solute-binding protein family 1; KEGG: tte:TTE0799 Sugar-binding periplasmic proteins/domains.
 
 
 0.939
Caur_1271
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rca:Rcas_0115 binding-protein-dependent transport systems inner membrane component.
   0.876
Caur_0363
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_0127 binding-protein-dependent transport systems inner membrane component.
   0.872
Caur_1107
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: syn:slr1202 putative ABC-type lactose transport system permease protein.
   0.870
Caur_0495
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ade:Adeh_4135 ABC sugar transporter, inner membrane subunit.
   0.868
Caur_1077
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC3281 sugar ABC transporter permease.
 
   0.868
Caur_2675
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lin:lin0218 similar to sugar ABC transporters, permease proteins.
 
   0.868
Caur_3153
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ade:Adeh_4135 ABC sugar transporter, inner membrane subunit.
 
   0.868
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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