Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Caur_2102KEGG: rrs:RoseRS_3448 hypothetical protein. (49 aa)    
Predicted Functional Partners:
Caur_2101
PFAM: DNA polymerase beta domain protein region; KEGG: rca:Rcas_3960 DNA polymerase beta domain protein region.
       0.776
Caur_2100
KEGG: rca:Rcas_3961 protein of unknown function DUF86.
       0.773
Caur_2099
PFAM: DNA polymerase beta domain protein region; KEGG: rrs:RoseRS_2453 DNA polymerase, beta domain protein region.
       0.755
Caur_2098
KEGG: rrs:RoseRS_3558 protein of unknown function DUF86.
       0.619
aroB
3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).
       0.490
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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