STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_2114PFAM: sulfotransferase; KEGG: sfu:Sfum_0779 sulfotransferase. (260 aa)    
Predicted Functional Partners:
sat-2
Sulfate adenylyltransferase; Catalyzes the synthesis of activated sulfate. Belongs to the sulfate adenylyltransferase family.
  
  
 0.898
Caur_2117
PFAM: glycosyl transferase group 1; KEGG: gsu:GSU3023 glycosyl transferase, group 1/2 family protein.
  
   0.750
Caur_2115
PFAM: transferase hexapeptide repeat containing protein; KEGG: sde:Sde_2350 response regulator receiver domain protein (CheY-like).
  
    0.737
Caur_2116
PFAM: glycosyl transferase family 2; KEGG: kra:Krad_3285 glycosyl transferase family 2.
  
    0.711
Caur_2112
PFAM: polysaccharide deacetylase; KEGG: bha:BH1917 chitooligosaccharide deacetylase.
  
  
 0.687
cysC
Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.
 
  
 0.573
Caur_2111
PFAM: glycosyl transferase family 2; KEGG: kra:Krad_3678 glycosyl transferase family 2.
  
    0.570
Caur_2118
Capsular exopolysaccharide family; KEGG: rca:Rcas_1353 non-specific protein-tyrosine kinase; TIGRFAM: capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein.
  
  
 0.527
Caur_3454
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_0641 tetratricopeptide TPR_2 repeat protein.
  
 
   0.527
Caur_3113
Hypothetical protein; KEGG: cme:CMH001C similar to hedgehog protein Pfam: Kelch_2 Kelch_1 Hint PROSITE: INTEIN_N_TER PRO_RICH THR_RICH.
  
     0.525
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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