STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_2125PFAM: glycosyl transferase family 2; KEGG: afw:Anae109_1238 glycosyl transferase family 2. (270 aa)    
Predicted Functional Partners:
fcl
NAD-dependent epimerase/dehydratase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.
 
   0.950
Caur_2122
PFAM: glycosyl transferase family 2; KEGG: gme:Gmet_1493 glycosyl transferase, family 2.
 
    
0.858
Caur_2124
Hypothetical protein; KEGG: ter:Tery_2168 glycosyl transferase, group 1.
  
   0.838
Caur_2126
PFAM: glycosyl transferase group 1; KEGG: cvi:CV_4120 probable glycosyltransferase.
  
   0.838
Caur_2123
Hypothetical protein.
  
    0.831
Caur_2127
PFAM: YdjC family protein; KEGG: gtn:GTNG_1202 putative phospho-beta-glucosidase.
  
    0.800
Caur_2128
KEGG: vch:VC0924 CapK protein, putative.
       0.791
Caur_2129
PFAM: glycosyl transferase group 1; KEGG: rso:RS02343 probable glycosyltransferase protein.
  
   0.791
Caur_2116
PFAM: glycosyl transferase family 2; KEGG: kra:Krad_3285 glycosyl transferase family 2.
 
    0.777
Caur_2120
PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mgm:Mmc1_2166 NAD-dependent epimerase/dehydratase.
  
   0.707
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.