STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_2139KEGG: noc:Noc_1243 hypothetical protein. (134 aa)    
Predicted Functional Partners:
Caur_2138
KEGG: rrs:RoseRS_4139 hypothetical protein.
     
 0.882
Caur_2140
KEGG: sus:Acid_0496 electron transport protein SCO1/SenC.
     
 0.835
Caur_2137
KEGG: aba:Acid345_3000 hypothetical protein.
     
 0.819
Caur_2141
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
     
 0.793
Caur_2136
KEGG: rrs:RoseRS_4140 Fe-S-cluster-containing hydrogenase components 1-like protein.
     
 0.786
Caur_2135
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: rca:Rcas_4296 protein of unknown function DUF224 cysteine-rich region domain protein.
     
 0.587
Caur_2132
D-lactate dehydrogenase (cytochrome); PFAM: FAD linked oxidase domain protein; KEGG: rca:Rcas_4146 D-lactate dehydrogenase (cytochrome).
     
 0.578
Caur_2133
PFAM: FAD linked oxidase domain protein; KEGG: rrs:RoseRS_3362 FAD linked oxidase domain protein.
     
 0.578
Caur_2134
D-lactate dehydrogenase (cytochrome); PFAM: FAD linked oxidase domain protein; KEGG: rrs:RoseRS_3360 D-lactate dehydrogenase (cytochrome).
     
 0.578
Caur_2142
Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
       0.577
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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