STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caur_2163KEGG: dar:Daro_3601 hypothetical protein. (1424 aa)    
Predicted Functional Partners:
Caur_2164
KEGG: rrs:RoseRS_1653 hypothetical protein.
 
   
 0.942
Caur_2170
PFAM: GPW/gp25 family protein; KEGG: bra:BRADO4378 hypothetical protein.
 
 
   0.936
Caur_2165
KEGG: bra:BRADO4383 conserved hypothetical protein; putative signal peptide.
 
     0.929
Caur_2167
KEGG: bra:BRADO4381 hypothetical protein.
 
 
   0.928
Caur_2171
KEGG: bra:BRADO4377 hypothetical protein.
 
 
   0.928
Caur_2166
KEGG: bra:BRADO4382 hypothetical protein.
 
   0.925
Caur_2161
PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: rca:Rcas_2830 AAA ATPase central domain protein.
 
  
 0.923
Caur_2168
KEGG: bra:BRADO4380 hypothetical protein.
 
  
 0.923
Caur_2160
KEGG: nha:Nham_0828 hypothetical protein.
 
     0.917
Caur_2158
KEGG: bra:BRADO4388 hypothetical protein.
 
     0.916
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.