Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
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experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
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[Homology]
Score
Caur_2222TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_1939 major facilitator superfamily MFS_1. (468 aa)    
Predicted Functional Partners:
Caur_2223
KEGG: rrs:RoseRS_1938 hypothetical protein.
       0.603
Caur_2221
PFAM: regulatory protein TetR; KEGG: rrs:RoseRS_1940 transcriptional regulator, TetR family.
     
 0.478
Caur_0149
KEGG: rrs:RoseRS_3857 amino acid permease-associated region.
  
 
 0.433
Caur_1734
PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: afw:Anae109_0558 major facilitator superfamily MFS_1.
  
   
 0.430
Caur_0894
ATP-binding region ATPase domain protein; PFAM: helix-turn-helix- domain containing protein AraC type; periplasmic binding protein/LacI transcriptional regulator; response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_0204 integral membrane sensor hybrid histidine kinase.
     
 0.429
Caur_3373
TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: dge:Dgeo_1147 drug resistance transporter EmrB/QacA subfamily.
 
  
0.426
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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