Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Caur_2252 | Caur_2253 | Hypothetical protein. | PFAM: PilT protein domain protein; KEGG: ana:all0753 hypothetical protein. | 0.494 |
Caur_2252 | Caur_2254 | Hypothetical protein. | KEGG: rrs:RoseRS_4296 hypothetical protein. | 0.494 |
Caur_2253 | Caur_2252 | PFAM: PilT protein domain protein; KEGG: ana:all0753 hypothetical protein. | Hypothetical protein. | 0.494 |
Caur_2253 | Caur_2254 | PFAM: PilT protein domain protein; KEGG: ana:all0753 hypothetical protein. | KEGG: rrs:RoseRS_4296 hypothetical protein. | 0.788 |
Caur_2253 | Caur_2255 | PFAM: PilT protein domain protein; KEGG: ana:all0753 hypothetical protein. | PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: ter:Tery_0647 adenylate/guanylate cyclase. | 0.428 |
Caur_2254 | Caur_2252 | KEGG: rrs:RoseRS_4296 hypothetical protein. | Hypothetical protein. | 0.494 |
Caur_2254 | Caur_2253 | KEGG: rrs:RoseRS_4296 hypothetical protein. | PFAM: PilT protein domain protein; KEGG: ana:all0753 hypothetical protein. | 0.788 |
Caur_2254 | Caur_2255 | KEGG: rrs:RoseRS_4296 hypothetical protein. | PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: ter:Tery_0647 adenylate/guanylate cyclase. | 0.428 |
Caur_2255 | Caur_2253 | PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: ter:Tery_0647 adenylate/guanylate cyclase. | PFAM: PilT protein domain protein; KEGG: ana:all0753 hypothetical protein. | 0.428 |
Caur_2255 | Caur_2254 | PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: ter:Tery_0647 adenylate/guanylate cyclase. | KEGG: rrs:RoseRS_4296 hypothetical protein. | 0.428 |