Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Caur_2282PFAM: carbohydrate kinase FGGY; KEGG: rca:Rcas_3453 carbohydrate kinase FGGY. (478 aa)    
Predicted Functional Partners:
rhaA
PFAM: L-rhamnose isomerase; KEGG: rca:Rcas_3455 L-rhamnose isomerase; Belongs to the rhamnose isomerase family.
 
 0.999
Caur_2283
TIGRFAM: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rrs:RoseRS_2731 rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
 
  
 0.980
Caur_2286
ABC-type sugar transport system periplasmic component-like protein; KEGG: ret:RHE_PE00289 probable sugar ABC transporter, substrate-binding protein.
 
  
 0.933
Caur_2285
PFAM: protein of unknown function DUF718; KEGG: rca:Rcas_3456 protein of unknown function DUF718.
 
  
 0.912
Caur_0361
PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase domain protein; KEGG: kra:Krad_0118 alpha-L-rhamnosidase.
 
   
 0.892
Caur_3572
PFAM: alpha-L-rhamnosidase; KEGG: art:Arth_1969 alpha-L-rhamnosidase.
 
   0.837
Caur_0590
PFAM: class II aldolase/adducin family protein; KEGG: aba:Acid345_4482 class II aldolase/adducin-like.
 
  
 0.783
Caur_2290
PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: rrs:RoseRS_2724 transcriptional regulator, DeoR family.
     
 0.735
Caur_0839
PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: ade:Adeh_3719 NADH-flavin oxidoreductase/NADH oxidase.
  
  
 0.629
Caur_2803
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
  
 
 0.609
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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