Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Caur_2285PFAM: protein of unknown function DUF718; KEGG: rca:Rcas_3456 protein of unknown function DUF718. (107 aa)    
Predicted Functional Partners:
rhaA
PFAM: L-rhamnose isomerase; KEGG: rca:Rcas_3455 L-rhamnose isomerase; Belongs to the rhamnose isomerase family.
 
  
 0.954
Caur_2282
PFAM: carbohydrate kinase FGGY; KEGG: rca:Rcas_3453 carbohydrate kinase FGGY.
 
  
 0.912
Caur_2283
TIGRFAM: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rrs:RoseRS_2731 rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
 
  
 0.900
Caur_2286
ABC-type sugar transport system periplasmic component-like protein; KEGG: ret:RHE_PE00289 probable sugar ABC transporter, substrate-binding protein.
 
    0.876
Caur_0361
PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase domain protein; KEGG: kra:Krad_0118 alpha-L-rhamnosidase.
 
     0.737
Caur_3572
PFAM: alpha-L-rhamnosidase; KEGG: art:Arth_1969 alpha-L-rhamnosidase.
  
     0.652
Caur_2287
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: rrs:RoseRS_2727 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
 
    0.539
Caur_2288
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: rrs:RoseRS_2726 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
  
    0.470
Caur_0364
PFAM: extracellular solute-binding protein family 1; KEGG: aau:AAur_0946 putative extracellular sugar-binding protein.
  
     0.422
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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